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genechip® human gene 1.0 st arrays  (Thermo Fisher)


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    Thermo Fisher genechip® human gene 1.0 st arrays
    Genechip® Human Gene 1.0 St Arrays, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/genechip%C2%AE+human+gene+1%2E0+st+arrays/pm39859144-51-11-17
    Average 90 stars, based on 1 article reviews
    genechip® human gene 1.0 st arrays - by Bioz Stars, 2026-09
    90/100 stars

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    Related Articles

    Isolation:

    Article Title: Widespread FRA1-Dependent Control of Mesenchymal Transdifferentiation Programs in Colorectal Cancer Cells
    Article Snippet: Microarray analysis using Affymetrix GeneChip® Human Gene 1.0 ST Arrays was performed on 4 biological replicates per cell line at the UNSW Ramaciotti Centre for Gene Expression Analysis.

    Article Title: Specific Syndecan-1 Domains Regulate Mesenchymal Tumor Cell Adhesion, Motility and Migration
    Article Snippet: The above RNA samples were applied to gene microarray analysis using GeneChip® Human Gene 1.0 ST Arrays (Affymetrix, Inc., Santa Clara, CA, USA), representing more than 22.000 well-annotated human genes.

    Article Title: A Clinical Metabolomics Strategy to Discover New Biomarkers in Complex Disease: An Overview.
    Article Snippet: In clinical metabolomics biomarker discovery is conducted by the complementary power of clinical study design and execution, molecular profiling technologies and an efficient bioinformatics strategy for biomarker search, verification and interpretation.. This survey article gives a review of useful bioinformatics methods for biomarker discovery, addressing the problem of data preprocessing, the data-driven search, prioritization and biological interpretation of metabolic biomarkers candidates in disase.. Advanced data mining approaches and new strategies using networkbased methods are discussed in more detail.

    Article Title: New Target Genes of MITF-Induced microRNA-211 Contribute to Melanoma Cell Invasion
    Article Snippet: Gene expression profiling experiments using GeneChip® Human Gene 1.0 ST arrays and miRNA profiling using GeneChip® miRNA arrays (Affymetrix, Santa Clara, CA, USA) were performed on two independent samples at the CRP-Santé Microarray Unit (Luxembourg) as described before and according to standard protocols.

    Article Title: The Platelet-Specific Gene Signature in the Immunoglobulin G4-Related Disease Transcriptome.
    Article Snippet: The total RNA was isolated from peripheral blood mononuclear cells and GeneChip® Human Gene 1.0 ST Arrays (Affymetrix®, Santa Clara, CA, USA) were used for hybridization [19].

    Article Title: Zinc Finger Nuclease Mediated Knockout of ADP-Dependent Glucokinase in Cancer Cell Lines: Effects on Cell Survival and Mitochondrial Oxidative Metabolism
    Article Snippet: 5, and fragmented, labelled single-stranded DNA was hybridised to Affymetrix GeneChip® Human Gene 1.0 ST arrays at 45°C in a hybridisation oven for 17 h. The arrays were washed and stained using the Affymetrix protocol FS450 _0001 in an Affymetrix GeneChip Fluidics Station 450, and scanned in an Affymetrix GeneChip Scanner 7G.

    Article Title: Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants
    Article Snippet: Subsequently, the associated with RNA chimeras variants were overlapping with genomic locations for transcripts associated with RNA binding proteins by using data in bed format produced by RIP-chip GeneST, Ribonomic profiling on Affymetrix GeneChip® Human Gene 1.0 ST Arrays as part of the ENCODE project .

    Article Title: The Heterotrimeric Laminin Coiled-Coil Domain Exerts Anti-Adhesive Effects and Induces a Pro-Invasive Phenotype
    Article Snippet: To study the effects of this interaction on the transcriptional profile of HT1080 cells, we performed a comprehensive DNA microarray analysis, using GeneChip® Affymetrix Human Gene 1.0 ST Arrays after 24 h-incubation in wells coated with BSA (control) or rLCC111.

    Hybridization:

    Article Title: Widespread FRA1-Dependent Control of Mesenchymal Transdifferentiation Programs in Colorectal Cancer Cells
    Article Snippet: Microarray analysis using Affymetrix GeneChip® Human Gene 1.0 ST Arrays was performed on 4 biological replicates per cell line at the UNSW Ramaciotti Centre for Gene Expression Analysis.

    Article Title: Specific Syndecan-1 Domains Regulate Mesenchymal Tumor Cell Adhesion, Motility and Migration
    Article Snippet: The above RNA samples were applied to gene microarray analysis using GeneChip® Human Gene 1.0 ST Arrays (Affymetrix, Inc., Santa Clara, CA, USA), representing more than 22.000 well-annotated human genes.

    Article Title: A Clinical Metabolomics Strategy to Discover New Biomarkers in Complex Disease: An Overview.
    Article Snippet: In clinical metabolomics biomarker discovery is conducted by the complementary power of clinical study design and execution, molecular profiling technologies and an efficient bioinformatics strategy for biomarker search, verification and interpretation.. This survey article gives a review of useful bioinformatics methods for biomarker discovery, addressing the problem of data preprocessing, the data-driven search, prioritization and biological interpretation of metabolic biomarkers candidates in disase.. Advanced data mining approaches and new strategies using networkbased methods are discussed in more detail.

    Article Title: New Target Genes of MITF-Induced microRNA-211 Contribute to Melanoma Cell Invasion
    Article Snippet: Gene expression profiling experiments using GeneChip® Human Gene 1.0 ST arrays and miRNA profiling using GeneChip® miRNA arrays (Affymetrix, Santa Clara, CA, USA) were performed on two independent samples at the CRP-Santé Microarray Unit (Luxembourg) as described before and according to standard protocols.

    Article Title: The Platelet-Specific Gene Signature in the Immunoglobulin G4-Related Disease Transcriptome.
    Article Snippet: The total RNA was isolated from peripheral blood mononuclear cells and GeneChip® Human Gene 1.0 ST Arrays (Affymetrix®, Santa Clara, CA, USA) were used for hybridization [19].

    Article Title: Zinc Finger Nuclease Mediated Knockout of ADP-Dependent Glucokinase in Cancer Cell Lines: Effects on Cell Survival and Mitochondrial Oxidative Metabolism
    Article Snippet: 5, and fragmented, labelled single-stranded DNA was hybridised to Affymetrix GeneChip® Human Gene 1.0 ST arrays at 45°C in a hybridisation oven for 17 h. The arrays were washed and stained using the Affymetrix protocol FS450 _0001 in an Affymetrix GeneChip Fluidics Station 450, and scanned in an Affymetrix GeneChip Scanner 7G.

    Article Title: Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants
    Article Snippet: Subsequently, the associated with RNA chimeras variants were overlapping with genomic locations for transcripts associated with RNA binding proteins by using data in bed format produced by RIP-chip GeneST, Ribonomic profiling on Affymetrix GeneChip® Human Gene 1.0 ST Arrays as part of the ENCODE project .

    Article Title: The Heterotrimeric Laminin Coiled-Coil Domain Exerts Anti-Adhesive Effects and Induces a Pro-Invasive Phenotype
    Article Snippet: To study the effects of this interaction on the transcriptional profile of HT1080 cells, we performed a comprehensive DNA microarray analysis, using GeneChip® Affymetrix Human Gene 1.0 ST Arrays after 24 h-incubation in wells coated with BSA (control) or rLCC111.

    Expressing:

    Article Title: Widespread FRA1-Dependent Control of Mesenchymal Transdifferentiation Programs in Colorectal Cancer Cells
    Article Snippet: Microarray analysis using Affymetrix GeneChip® Human Gene 1.0 ST Arrays was performed on 4 biological replicates per cell line at the UNSW Ramaciotti Centre for Gene Expression Analysis.

    Article Title: Specific Syndecan-1 Domains Regulate Mesenchymal Tumor Cell Adhesion, Motility and Migration
    Article Snippet: The above RNA samples were applied to gene microarray analysis using GeneChip® Human Gene 1.0 ST Arrays (Affymetrix, Inc., Santa Clara, CA, USA), representing more than 22.000 well-annotated human genes.

    Article Title: A Clinical Metabolomics Strategy to Discover New Biomarkers in Complex Disease: An Overview.
    Article Snippet: In clinical metabolomics biomarker discovery is conducted by the complementary power of clinical study design and execution, molecular profiling technologies and an efficient bioinformatics strategy for biomarker search, verification and interpretation.. This survey article gives a review of useful bioinformatics methods for biomarker discovery, addressing the problem of data preprocessing, the data-driven search, prioritization and biological interpretation of metabolic biomarkers candidates in disase.. Advanced data mining approaches and new strategies using networkbased methods are discussed in more detail.

    Article Title: New Target Genes of MITF-Induced microRNA-211 Contribute to Melanoma Cell Invasion
    Article Snippet: Gene expression profiling experiments using GeneChip® Human Gene 1.0 ST arrays and miRNA profiling using GeneChip® miRNA arrays (Affymetrix, Santa Clara, CA, USA) were performed on two independent samples at the CRP-Santé Microarray Unit (Luxembourg) as described before and according to standard protocols.

    Article Title: The Platelet-Specific Gene Signature in the Immunoglobulin G4-Related Disease Transcriptome.
    Article Snippet: The total RNA was isolated from peripheral blood mononuclear cells and GeneChip® Human Gene 1.0 ST Arrays (Affymetrix®, Santa Clara, CA, USA) were used for hybridization [19].

    Article Title: Zinc Finger Nuclease Mediated Knockout of ADP-Dependent Glucokinase in Cancer Cell Lines: Effects on Cell Survival and Mitochondrial Oxidative Metabolism
    Article Snippet: 5, and fragmented, labelled single-stranded DNA was hybridised to Affymetrix GeneChip® Human Gene 1.0 ST arrays at 45°C in a hybridisation oven for 17 h. The arrays were washed and stained using the Affymetrix protocol FS450 _0001 in an Affymetrix GeneChip Fluidics Station 450, and scanned in an Affymetrix GeneChip Scanner 7G.

    Article Title: Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants
    Article Snippet: Subsequently, the associated with RNA chimeras variants were overlapping with genomic locations for transcripts associated with RNA binding proteins by using data in bed format produced by RIP-chip GeneST, Ribonomic profiling on Affymetrix GeneChip® Human Gene 1.0 ST Arrays as part of the ENCODE project .

    Article Title: The Heterotrimeric Laminin Coiled-Coil Domain Exerts Anti-Adhesive Effects and Induces a Pro-Invasive Phenotype
    Article Snippet: To study the effects of this interaction on the transcriptional profile of HT1080 cells, we performed a comprehensive DNA microarray analysis, using GeneChip® Affymetrix Human Gene 1.0 ST Arrays after 24 h-incubation in wells coated with BSA (control) or rLCC111.

    Microarray:

    Article Title: Widespread FRA1-Dependent Control of Mesenchymal Transdifferentiation Programs in Colorectal Cancer Cells
    Article Snippet: Microarray analysis using Affymetrix GeneChip® Human Gene 1.0 ST Arrays was performed on 4 biological replicates per cell line at the UNSW Ramaciotti Centre for Gene Expression Analysis.

    Article Title: Specific Syndecan-1 Domains Regulate Mesenchymal Tumor Cell Adhesion, Motility and Migration
    Article Snippet: The above RNA samples were applied to gene microarray analysis using GeneChip® Human Gene 1.0 ST Arrays (Affymetrix, Inc., Santa Clara, CA, USA), representing more than 22.000 well-annotated human genes.

    Article Title: A Clinical Metabolomics Strategy to Discover New Biomarkers in Complex Disease: An Overview.
    Article Snippet: In clinical metabolomics biomarker discovery is conducted by the complementary power of clinical study design and execution, molecular profiling technologies and an efficient bioinformatics strategy for biomarker search, verification and interpretation.. This survey article gives a review of useful bioinformatics methods for biomarker discovery, addressing the problem of data preprocessing, the data-driven search, prioritization and biological interpretation of metabolic biomarkers candidates in disase.. Advanced data mining approaches and new strategies using networkbased methods are discussed in more detail.

    Article Title: New Target Genes of MITF-Induced microRNA-211 Contribute to Melanoma Cell Invasion
    Article Snippet: Gene expression profiling experiments using GeneChip® Human Gene 1.0 ST arrays and miRNA profiling using GeneChip® miRNA arrays (Affymetrix, Santa Clara, CA, USA) were performed on two independent samples at the CRP-Santé Microarray Unit (Luxembourg) as described before and according to standard protocols.

    Article Title: The Platelet-Specific Gene Signature in the Immunoglobulin G4-Related Disease Transcriptome.
    Article Snippet: The total RNA was isolated from peripheral blood mononuclear cells and GeneChip® Human Gene 1.0 ST Arrays (Affymetrix®, Santa Clara, CA, USA) were used for hybridization [19].

    Article Title: Zinc Finger Nuclease Mediated Knockout of ADP-Dependent Glucokinase in Cancer Cell Lines: Effects on Cell Survival and Mitochondrial Oxidative Metabolism
    Article Snippet: 5, and fragmented, labelled single-stranded DNA was hybridised to Affymetrix GeneChip® Human Gene 1.0 ST arrays at 45°C in a hybridisation oven for 17 h. The arrays were washed and stained using the Affymetrix protocol FS450 _0001 in an Affymetrix GeneChip Fluidics Station 450, and scanned in an Affymetrix GeneChip Scanner 7G.

    Article Title: Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants
    Article Snippet: Subsequently, the associated with RNA chimeras variants were overlapping with genomic locations for transcripts associated with RNA binding proteins by using data in bed format produced by RIP-chip GeneST, Ribonomic profiling on Affymetrix GeneChip® Human Gene 1.0 ST Arrays as part of the ENCODE project .

    Article Title: The Heterotrimeric Laminin Coiled-Coil Domain Exerts Anti-Adhesive Effects and Induces a Pro-Invasive Phenotype
    Article Snippet: To study the effects of this interaction on the transcriptional profile of HT1080 cells, we performed a comprehensive DNA microarray analysis, using GeneChip® Affymetrix Human Gene 1.0 ST Arrays after 24 h-incubation in wells coated with BSA (control) or rLCC111.

    Staining:

    Article Title: Widespread FRA1-Dependent Control of Mesenchymal Transdifferentiation Programs in Colorectal Cancer Cells
    Article Snippet: Microarray analysis using Affymetrix GeneChip® Human Gene 1.0 ST Arrays was performed on 4 biological replicates per cell line at the UNSW Ramaciotti Centre for Gene Expression Analysis.

    Article Title: Specific Syndecan-1 Domains Regulate Mesenchymal Tumor Cell Adhesion, Motility and Migration
    Article Snippet: The above RNA samples were applied to gene microarray analysis using GeneChip® Human Gene 1.0 ST Arrays (Affymetrix, Inc., Santa Clara, CA, USA), representing more than 22.000 well-annotated human genes.

    Article Title: A Clinical Metabolomics Strategy to Discover New Biomarkers in Complex Disease: An Overview.
    Article Snippet: In clinical metabolomics biomarker discovery is conducted by the complementary power of clinical study design and execution, molecular profiling technologies and an efficient bioinformatics strategy for biomarker search, verification and interpretation.. This survey article gives a review of useful bioinformatics methods for biomarker discovery, addressing the problem of data preprocessing, the data-driven search, prioritization and biological interpretation of metabolic biomarkers candidates in disase.. Advanced data mining approaches and new strategies using networkbased methods are discussed in more detail.

    Article Title: New Target Genes of MITF-Induced microRNA-211 Contribute to Melanoma Cell Invasion
    Article Snippet: Gene expression profiling experiments using GeneChip® Human Gene 1.0 ST arrays and miRNA profiling using GeneChip® miRNA arrays (Affymetrix, Santa Clara, CA, USA) were performed on two independent samples at the CRP-Santé Microarray Unit (Luxembourg) as described before and according to standard protocols.

    Article Title: The Platelet-Specific Gene Signature in the Immunoglobulin G4-Related Disease Transcriptome.
    Article Snippet: The total RNA was isolated from peripheral blood mononuclear cells and GeneChip® Human Gene 1.0 ST Arrays (Affymetrix®, Santa Clara, CA, USA) were used for hybridization [19].

    Article Title: Zinc Finger Nuclease Mediated Knockout of ADP-Dependent Glucokinase in Cancer Cell Lines: Effects on Cell Survival and Mitochondrial Oxidative Metabolism
    Article Snippet: 5, and fragmented, labelled single-stranded DNA was hybridised to Affymetrix GeneChip® Human Gene 1.0 ST arrays at 45°C in a hybridisation oven for 17 h. The arrays were washed and stained using the Affymetrix protocol FS450 _0001 in an Affymetrix GeneChip Fluidics Station 450, and scanned in an Affymetrix GeneChip Scanner 7G.

    Article Title: Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants
    Article Snippet: Subsequently, the associated with RNA chimeras variants were overlapping with genomic locations for transcripts associated with RNA binding proteins by using data in bed format produced by RIP-chip GeneST, Ribonomic profiling on Affymetrix GeneChip® Human Gene 1.0 ST Arrays as part of the ENCODE project .

    Article Title: The Heterotrimeric Laminin Coiled-Coil Domain Exerts Anti-Adhesive Effects and Induces a Pro-Invasive Phenotype
    Article Snippet: To study the effects of this interaction on the transcriptional profile of HT1080 cells, we performed a comprehensive DNA microarray analysis, using GeneChip® Affymetrix Human Gene 1.0 ST Arrays after 24 h-incubation in wells coated with BSA (control) or rLCC111.

    Knock-Out:

    Article Title: Widespread FRA1-Dependent Control of Mesenchymal Transdifferentiation Programs in Colorectal Cancer Cells
    Article Snippet: Microarray analysis using Affymetrix GeneChip® Human Gene 1.0 ST Arrays was performed on 4 biological replicates per cell line at the UNSW Ramaciotti Centre for Gene Expression Analysis.

    Article Title: Specific Syndecan-1 Domains Regulate Mesenchymal Tumor Cell Adhesion, Motility and Migration
    Article Snippet: The above RNA samples were applied to gene microarray analysis using GeneChip® Human Gene 1.0 ST Arrays (Affymetrix, Inc., Santa Clara, CA, USA), representing more than 22.000 well-annotated human genes.

    Article Title: A Clinical Metabolomics Strategy to Discover New Biomarkers in Complex Disease: An Overview.
    Article Snippet: In clinical metabolomics biomarker discovery is conducted by the complementary power of clinical study design and execution, molecular profiling technologies and an efficient bioinformatics strategy for biomarker search, verification and interpretation.. This survey article gives a review of useful bioinformatics methods for biomarker discovery, addressing the problem of data preprocessing, the data-driven search, prioritization and biological interpretation of metabolic biomarkers candidates in disase.. Advanced data mining approaches and new strategies using networkbased methods are discussed in more detail.

    Article Title: New Target Genes of MITF-Induced microRNA-211 Contribute to Melanoma Cell Invasion
    Article Snippet: Gene expression profiling experiments using GeneChip® Human Gene 1.0 ST arrays and miRNA profiling using GeneChip® miRNA arrays (Affymetrix, Santa Clara, CA, USA) were performed on two independent samples at the CRP-Santé Microarray Unit (Luxembourg) as described before and according to standard protocols.

    Article Title: The Platelet-Specific Gene Signature in the Immunoglobulin G4-Related Disease Transcriptome.
    Article Snippet: The total RNA was isolated from peripheral blood mononuclear cells and GeneChip® Human Gene 1.0 ST Arrays (Affymetrix®, Santa Clara, CA, USA) were used for hybridization [19].

    Article Title: Zinc Finger Nuclease Mediated Knockout of ADP-Dependent Glucokinase in Cancer Cell Lines: Effects on Cell Survival and Mitochondrial Oxidative Metabolism
    Article Snippet: 5, and fragmented, labelled single-stranded DNA was hybridised to Affymetrix GeneChip® Human Gene 1.0 ST arrays at 45°C in a hybridisation oven for 17 h. The arrays were washed and stained using the Affymetrix protocol FS450 _0001 in an Affymetrix GeneChip Fluidics Station 450, and scanned in an Affymetrix GeneChip Scanner 7G.

    Article Title: Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants
    Article Snippet: Subsequently, the associated with RNA chimeras variants were overlapping with genomic locations for transcripts associated with RNA binding proteins by using data in bed format produced by RIP-chip GeneST, Ribonomic profiling on Affymetrix GeneChip® Human Gene 1.0 ST Arrays as part of the ENCODE project .

    Article Title: The Heterotrimeric Laminin Coiled-Coil Domain Exerts Anti-Adhesive Effects and Induces a Pro-Invasive Phenotype
    Article Snippet: To study the effects of this interaction on the transcriptional profile of HT1080 cells, we performed a comprehensive DNA microarray analysis, using GeneChip® Affymetrix Human Gene 1.0 ST Arrays after 24 h-incubation in wells coated with BSA (control) or rLCC111.

    Clone Assay:

    Article Title: Widespread FRA1-Dependent Control of Mesenchymal Transdifferentiation Programs in Colorectal Cancer Cells
    Article Snippet: Microarray analysis using Affymetrix GeneChip® Human Gene 1.0 ST Arrays was performed on 4 biological replicates per cell line at the UNSW Ramaciotti Centre for Gene Expression Analysis.

    Article Title: Specific Syndecan-1 Domains Regulate Mesenchymal Tumor Cell Adhesion, Motility and Migration
    Article Snippet: The above RNA samples were applied to gene microarray analysis using GeneChip® Human Gene 1.0 ST Arrays (Affymetrix, Inc., Santa Clara, CA, USA), representing more than 22.000 well-annotated human genes.

    Article Title: A Clinical Metabolomics Strategy to Discover New Biomarkers in Complex Disease: An Overview.
    Article Snippet: In clinical metabolomics biomarker discovery is conducted by the complementary power of clinical study design and execution, molecular profiling technologies and an efficient bioinformatics strategy for biomarker search, verification and interpretation.. This survey article gives a review of useful bioinformatics methods for biomarker discovery, addressing the problem of data preprocessing, the data-driven search, prioritization and biological interpretation of metabolic biomarkers candidates in disase.. Advanced data mining approaches and new strategies using networkbased methods are discussed in more detail.

    Article Title: New Target Genes of MITF-Induced microRNA-211 Contribute to Melanoma Cell Invasion
    Article Snippet: Gene expression profiling experiments using GeneChip® Human Gene 1.0 ST arrays and miRNA profiling using GeneChip® miRNA arrays (Affymetrix, Santa Clara, CA, USA) were performed on two independent samples at the CRP-Santé Microarray Unit (Luxembourg) as described before and according to standard protocols.

    Article Title: The Platelet-Specific Gene Signature in the Immunoglobulin G4-Related Disease Transcriptome.
    Article Snippet: The total RNA was isolated from peripheral blood mononuclear cells and GeneChip® Human Gene 1.0 ST Arrays (Affymetrix®, Santa Clara, CA, USA) were used for hybridization [19].

    Article Title: Zinc Finger Nuclease Mediated Knockout of ADP-Dependent Glucokinase in Cancer Cell Lines: Effects on Cell Survival and Mitochondrial Oxidative Metabolism
    Article Snippet: 5, and fragmented, labelled single-stranded DNA was hybridised to Affymetrix GeneChip® Human Gene 1.0 ST arrays at 45°C in a hybridisation oven for 17 h. The arrays were washed and stained using the Affymetrix protocol FS450 _0001 in an Affymetrix GeneChip Fluidics Station 450, and scanned in an Affymetrix GeneChip Scanner 7G.

    Article Title: Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants
    Article Snippet: Subsequently, the associated with RNA chimeras variants were overlapping with genomic locations for transcripts associated with RNA binding proteins by using data in bed format produced by RIP-chip GeneST, Ribonomic profiling on Affymetrix GeneChip® Human Gene 1.0 ST Arrays as part of the ENCODE project .

    Article Title: The Heterotrimeric Laminin Coiled-Coil Domain Exerts Anti-Adhesive Effects and Induces a Pro-Invasive Phenotype
    Article Snippet: To study the effects of this interaction on the transcriptional profile of HT1080 cells, we performed a comprehensive DNA microarray analysis, using GeneChip® Affymetrix Human Gene 1.0 ST Arrays after 24 h-incubation in wells coated with BSA (control) or rLCC111.

    RNA Binding Assay:

    Article Title: Widespread FRA1-Dependent Control of Mesenchymal Transdifferentiation Programs in Colorectal Cancer Cells
    Article Snippet: Microarray analysis using Affymetrix GeneChip® Human Gene 1.0 ST Arrays was performed on 4 biological replicates per cell line at the UNSW Ramaciotti Centre for Gene Expression Analysis.

    Article Title: Specific Syndecan-1 Domains Regulate Mesenchymal Tumor Cell Adhesion, Motility and Migration
    Article Snippet: The above RNA samples were applied to gene microarray analysis using GeneChip® Human Gene 1.0 ST Arrays (Affymetrix, Inc., Santa Clara, CA, USA), representing more than 22.000 well-annotated human genes.

    Article Title: A Clinical Metabolomics Strategy to Discover New Biomarkers in Complex Disease: An Overview.
    Article Snippet: In clinical metabolomics biomarker discovery is conducted by the complementary power of clinical study design and execution, molecular profiling technologies and an efficient bioinformatics strategy for biomarker search, verification and interpretation.. This survey article gives a review of useful bioinformatics methods for biomarker discovery, addressing the problem of data preprocessing, the data-driven search, prioritization and biological interpretation of metabolic biomarkers candidates in disase.. Advanced data mining approaches and new strategies using networkbased methods are discussed in more detail.

    Article Title: New Target Genes of MITF-Induced microRNA-211 Contribute to Melanoma Cell Invasion
    Article Snippet: Gene expression profiling experiments using GeneChip® Human Gene 1.0 ST arrays and miRNA profiling using GeneChip® miRNA arrays (Affymetrix, Santa Clara, CA, USA) were performed on two independent samples at the CRP-Santé Microarray Unit (Luxembourg) as described before and according to standard protocols.

    Article Title: The Platelet-Specific Gene Signature in the Immunoglobulin G4-Related Disease Transcriptome.
    Article Snippet: The total RNA was isolated from peripheral blood mononuclear cells and GeneChip® Human Gene 1.0 ST Arrays (Affymetrix®, Santa Clara, CA, USA) were used for hybridization [19].

    Article Title: Zinc Finger Nuclease Mediated Knockout of ADP-Dependent Glucokinase in Cancer Cell Lines: Effects on Cell Survival and Mitochondrial Oxidative Metabolism
    Article Snippet: 5, and fragmented, labelled single-stranded DNA was hybridised to Affymetrix GeneChip® Human Gene 1.0 ST arrays at 45°C in a hybridisation oven for 17 h. The arrays were washed and stained using the Affymetrix protocol FS450 _0001 in an Affymetrix GeneChip Fluidics Station 450, and scanned in an Affymetrix GeneChip Scanner 7G.

    Article Title: Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants
    Article Snippet: Subsequently, the associated with RNA chimeras variants were overlapping with genomic locations for transcripts associated with RNA binding proteins by using data in bed format produced by RIP-chip GeneST, Ribonomic profiling on Affymetrix GeneChip® Human Gene 1.0 ST Arrays as part of the ENCODE project .

    Article Title: The Heterotrimeric Laminin Coiled-Coil Domain Exerts Anti-Adhesive Effects and Induces a Pro-Invasive Phenotype
    Article Snippet: To study the effects of this interaction on the transcriptional profile of HT1080 cells, we performed a comprehensive DNA microarray analysis, using GeneChip® Affymetrix Human Gene 1.0 ST Arrays after 24 h-incubation in wells coated with BSA (control) or rLCC111.

    Produced:

    Article Title: Widespread FRA1-Dependent Control of Mesenchymal Transdifferentiation Programs in Colorectal Cancer Cells
    Article Snippet: Microarray analysis using Affymetrix GeneChip® Human Gene 1.0 ST Arrays was performed on 4 biological replicates per cell line at the UNSW Ramaciotti Centre for Gene Expression Analysis.

    Article Title: Specific Syndecan-1 Domains Regulate Mesenchymal Tumor Cell Adhesion, Motility and Migration
    Article Snippet: The above RNA samples were applied to gene microarray analysis using GeneChip® Human Gene 1.0 ST Arrays (Affymetrix, Inc., Santa Clara, CA, USA), representing more than 22.000 well-annotated human genes.

    Article Title: A Clinical Metabolomics Strategy to Discover New Biomarkers in Complex Disease: An Overview.
    Article Snippet: In clinical metabolomics biomarker discovery is conducted by the complementary power of clinical study design and execution, molecular profiling technologies and an efficient bioinformatics strategy for biomarker search, verification and interpretation.. This survey article gives a review of useful bioinformatics methods for biomarker discovery, addressing the problem of data preprocessing, the data-driven search, prioritization and biological interpretation of metabolic biomarkers candidates in disase.. Advanced data mining approaches and new strategies using networkbased methods are discussed in more detail.

    Article Title: New Target Genes of MITF-Induced microRNA-211 Contribute to Melanoma Cell Invasion
    Article Snippet: Gene expression profiling experiments using GeneChip® Human Gene 1.0 ST arrays and miRNA profiling using GeneChip® miRNA arrays (Affymetrix, Santa Clara, CA, USA) were performed on two independent samples at the CRP-Santé Microarray Unit (Luxembourg) as described before and according to standard protocols.

    Article Title: The Platelet-Specific Gene Signature in the Immunoglobulin G4-Related Disease Transcriptome.
    Article Snippet: The total RNA was isolated from peripheral blood mononuclear cells and GeneChip® Human Gene 1.0 ST Arrays (Affymetrix®, Santa Clara, CA, USA) were used for hybridization [19].

    Article Title: Zinc Finger Nuclease Mediated Knockout of ADP-Dependent Glucokinase in Cancer Cell Lines: Effects on Cell Survival and Mitochondrial Oxidative Metabolism
    Article Snippet: 5, and fragmented, labelled single-stranded DNA was hybridised to Affymetrix GeneChip® Human Gene 1.0 ST arrays at 45°C in a hybridisation oven for 17 h. The arrays were washed and stained using the Affymetrix protocol FS450 _0001 in an Affymetrix GeneChip Fluidics Station 450, and scanned in an Affymetrix GeneChip Scanner 7G.

    Article Title: Tandem RNA Chimeras Contribute to Transcriptome Diversity in Human Population and Are Associated with Intronic Genetic Variants
    Article Snippet: Subsequently, the associated with RNA chimeras variants were overlapping with genomic locations for transcripts associated with RNA binding proteins by using data in bed format produced by RIP-chip GeneST, Ribonomic profiling on Affymetrix GeneChip® Human Gene 1.0 ST Arrays as part of the ENCODE project .

    Article Title: The Heterotrimeric Laminin Coiled-Coil Domain Exerts Anti-Adhesive Effects and Induces a Pro-Invasive Phenotype
    Article Snippet: To study the effects of this interaction on the transcriptional profile of HT1080 cells, we performed a comprehensive DNA microarray analysis, using GeneChip® Affymetrix Human Gene 1.0 ST Arrays after 24 h-incubation in wells coated with BSA (control) or rLCC111.



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    Number of probes, genes, and samples of each dataset.
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    Number of probes, genes, and samples of each dataset.
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    Image Search Results


    Number of probes, genes, and samples of each dataset.

    Journal: Heliyon

    Article Title: Unveiling mitochondria as central components driving cognitive decline in alzheimer's disease through cross-transcriptomic analysis of hippocampus and entorhinal cortex microarray datasets

    doi: 10.1016/j.heliyon.2024.e39378

    Figure Lengend Snippet: Number of probes, genes, and samples of each dataset.

    Article Snippet: Samples in GSE36980 were subjected to microarray analysis using the GeneChip Human Gene 1.0 ST array (GPL6244) (Affymetrix, Santa Clara, CA, USA), which consisted of 33,297 probes.

    Techniques: